Skip to contents

Reactome Diseases

Source: R/reactome_content.R
rba_reactome_diseases.Rd

This function Retrieve a list of all diseases or disease DOIDs annotated in Reactome.

Usage

rba_reactome_diseases(doid = FALSE, ...)

Arguments

doid

Logical: (default = FALSE) Return disease DOIDs instead of diseases?

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Value

Data frame containing all the disease annotation available at Reactome. If doid was set to TRUE, DOID info will be returned instead.

Corresponding API Resources

"GET https://reactome.org/ContentService/data/diseases"
"GET https://reactome.org/ContentService/data/diseases/doid"

References

  • Ragueneau, E., Gong, C., Sinquin, P., Sevilla, C., Beavers, D., Grentner, A., ... D’Eustachio, P. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Res., 54(D1), D673–D681. doi: 10.1093/nar/gkaf1223

  • Griss, J., Viteri, G., Sidiropoulos, K., Nguyen, V., Fabregat, A., & Hermjakob, H. (2020). ReactomeGSA—Efficient Multi-Omics Comparative Pathway Analysis. Molecular & Cellular Proteomics, 19(12), 2115–2125. doi: 10.1074/mcp.TIR120.002155

  • Reactome Content Services API Documentation

  • Citations note on Reactome website

Examples

# \donttest{
rba_reactome_diseases()
# }
# \donttest{
rba_reactome_diseases(doid = TRUE)
# }