Retrieve the Results of a Finished miEAA Enrichment Analysis

After your submitted enrichment analysis request has finished (check using rba_mieaa_enrich_status), you can retrieve the results using this function.

Usage

rba_mieaa_enrich_results(job_id, sort_by = "p_adjusted", sort_asc = TRUE, ...)

Arguments

job_id

Character: Job ID of a submitted enrichment analysis.

sort_by

Character: (default = "p_adjusted") Result column to sort by. One of: "category", "subcategory", "enrichment", "p_value", "p_adjusted", "q_value", or "observed".

sort_asc

Logical: (default = TRUE) If TRUE, sort the results in ascending order. If FALSE, sort them in descending order.

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Value

A data frame with your enrichment analysis results.

Details

Note that using rba_mieaa_enrich is a more convenient way to automatically perform this and other required function calls to perform enrichment analysis on your input miRNA-set using miEAA.

Corresponding API Resources

"GET https://ccb-compute2.cs.uni-saarland.de/mieaa/api/v1/enrichment_analysis/results/{job_id}/"

References

• Ernesto Aparicio-Puerta, Pascal Hirsch, Georges P. Schmartz, Fabian Kern, Tobias Fehlmann, Andreas Keller, miEAA 2023: updates, new functional microRNA sets and improved enrichment visualizations, Nucleic Acids Research, Volume 51, Issue W1, 5 July 2023, Pages W319–W325, https://doi.org/10.1093/nar/gkad392

• miEAA browsable API tutorial

• Citation note on miEAA website

See also

Other "miEAA": rba_mieaa_cats(), rba_mieaa_convert_type(), rba_mieaa_convert_version(), rba_mieaa_enrich(), rba_mieaa_enrich_status(), rba_mieaa_enrich_submit()

Examples

if (FALSE) { # \dontrun{
rba_mieaa_enrich_results("f52d1aef-6d3d-4d51-9020-82e68fe99012")
} # }