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Get Gene-Centric proteins by UniProt Accession

Source: R/uniprot_proteomes.R
rba_uniprot_genecentric.Rd

Using this function you can retrieve gene-centrics data. For more information, see What are proteomes? and Automatic gene-centric isoform mapping for eukaryotic reference proteome entries..

Usage

rba_uniprot_genecentric(accession, ...)

Arguments

accession

UniProtKB primary or secondary accession.

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Value

A list containing information of Gene-Centric proteins.

Corresponding API Resources

"GET https://ebi.ac.uk/proteins/api/genecentric/{accession}"

References

  • The UniProt Consortium, UniProt: the universal protein knowledgebase in 2021, Nucleic Acids Research, Volume 49, Issue D1, 8 January 2021, Pages D480–D489, https://doi.org/10.1093/nar/gkaa1100

  • Andrew Nightingale, Ricardo Antunes, Emanuele Alpi, Borisas Bursteinas, Leonardo Gonzales, Wudong Liu, Jie Luo, Guoying Qi, Edd Turner, Maria Martin, The Proteins API: accessing key integrated protein and genome information, Nucleic Acids Research, Volume 45, Issue W1, 3 July 2017, Pages W539–W544, https://doi.org/10.1093/nar/gkx237

  • Proteins API Documentation

  • Citations note on UniProt website

See also

Other "UniProt - Proteomes": rba_uniprot_genecentric_search(), rba_uniprot_proteomes(), rba_uniprot_proteomes_search()

Examples

# \donttest{
rba_uniprot_genecentric("P29965")
# }