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Get Complexes That Include a Molecule

Source: R/reactome_content.R
rba_reactome_complex_list.Rd

This function will retrieve a list of complexes that include your supplied molecule as a component.

Usage

rba_reactome_complex_list(id, resource, ...)

Arguments

id

Character: Molecule's external Identifier

resource

Character: What is the resource of your supplied ID? see: Reactome External Identifiers

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Value

Data frame where each row is a complex containing your supplied molecule and columns are pertinent information.

Corresponding API Resources

"GET https://reactome.org/ContentService/data/complexes/{resource}/ {identifier}"

References

  • Ragueneau, E., Gong, C., Sinquin, P., Sevilla, C., Beavers, D., Grentner, A., ... D’Eustachio, P. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Res., 54(D1), D673–D681. doi: 10.1093/nar/gkaf1223

  • Griss, J., Viteri, G., Sidiropoulos, K., Nguyen, V., Fabregat, A., & Hermjakob, H. (2020). ReactomeGSA—Efficient Multi-Omics Comparative Pathway Analysis. Molecular & Cellular Proteomics, 19(12), 2115–2125. doi: 10.1074/mcp.TIR120.002155

  • Reactome Content Services API Documentation

  • Citations note on Reactome website

See also

Other "Reactome Content Service - Physical Entity Queries": rba_reactome_complex_subunits(), rba_reactome_entity_other_forms(), rba_reactome_participant_of()

Examples

# \donttest{
rba_reactome_complex_list(id = "3845", resource = "NCBI Gene")
# }
# \donttest{
rba_reactome_complex_list(id = "P00533", resource = "UniProt")
# }