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List matrix profile versions associated with a base ID

Source: R/jaspar.R
rba_jaspar_matrix_versions.Rd

Since JASPAR release 2010, matrix profiles have been versioned. A matrix profile identifier follows a "base_id.version" naming scheme. Using this function, you can retrieve a list of matrix profiles associated with a base (stable) ID.

Usage

rba_jaspar_matrix_versions(base_id, order = NULL, ...)

Arguments

base_id

Character: A base (stable) identifier. A matrix profile identifier follows a "base_id.version" naming scheme.

order

Character: A character string or a vector of character strings of field names that will be used to order the results.
Providing multiple field names is supported. You can also use the prefix "-" before a field name to indicate reverse ordering.

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Value

A data frame with information on the matrix profile versions.

Corresponding API Resources

"GET https://jaspar.elixir.no/api/v1/matrix/{base_id}/versions/"

References

  • Baydar Ovek D, et al. JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models. Nucleic Acids Res. 2026;54(D1):D184-D193; doi: 10.1093/nar/gkaf1209

  • Khan, A. and Mathelier, A. JASPAR RESTful API: accessing JASPAR data from any programming language. Bioinformatics, 2017, doi: 10.1093/bioinformatics/btx804

  • JASPAR API Documentation

  • Citations note on JASPAR website

See also

Other "JASPAR": rba_jaspar_collections(), rba_jaspar_collections_matrices(), rba_jaspar_matrix(), rba_jaspar_matrix_search(), rba_jaspar_releases(), rba_jaspar_sites(), rba_jaspar_species(), rba_jaspar_species_matrices(), rba_jaspar_taxons(), rba_jaspar_taxons_matrices(), rba_jaspar_tffm(), rba_jaspar_tffm_search()

Examples

# \donttest{
rba_jaspar_matrix_versions("MA0600")
# }